文章摘要
培养调控激活卡伍尔氏链霉菌NA4产frontalamides类物质的研究
Culture Regulation to Activate Frontalamides Production by Streptomyces cavourensis NA4
  
DOI:doi:10.3969/j.issn.1005-7021.2018.02.005
中文关键词: 卡伍尔氏链霉菌  Polycyclic tetramate macrolactam  Frontalamides  培养调控  基因组挖掘
英文关键词: Streptomyces cavourensis  polycyclic tetramate macrolactam (PTM)  frontalamides  culture regulation  genome burrowing
基金项目:国家自然科学基金项目(41576136);辽宁省博士科研启动基金项目(201501036);国家863计划项目子课题(2012AA092104-6)
作者单位
张盈 中国科学院 沈阳应用生态研究所辽宁 沈阳 110016中国科学院大学北京 100049 
潘华奇 中国科学院 沈阳应用生态研究所辽宁 沈阳 110016 
于素亚 中国科学院 沈阳应用生态研究所辽宁 沈阳 110016 
胡江春 中国科学院 沈阳应用生态研究所辽宁 沈阳 110016 
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中文摘要:
      微生物 (尤其是链霉菌) 是农用抗生素的主要来源之一。前期基因筛选发现卡沃尔氏链霉菌NA4具有产生多种PKS和NRPS类型化合物的潜能,但只分离到PKS I型的抗植物病原真菌的物质bafilomycins,为了挖掘更多的抗真菌先导化合物,采用Hiseq2500高通量测序技术获得其基因组扫描图,经生物信息学分析和文献检索发现,其除了能产生bafilomycins,还具有产生 polycyclic tetramate macrolactam (PTM)、alkylresorcinol和valinomycin类型抗真菌活性物质的潜力。为了激活这些基因簇,采用基于OSMAC策略中的培养调控为手段,通过改变培养基碳氮源组分,添加氨基酸前体及不同金属离子,使用活性追踪和HPLC UV 发现用麸皮替代NM2培养基中甘油的培养条件能激活PTM类型frontalamides合成基因簇,经LC MS分析有7个主要的化合物是PTM类化合物,其中的3个可能为新化合物。通过培养调控激活了PTM基因簇,为新型PTM类化合物进一步的分离鉴定提供参考。
英文摘要:
      Microorganisms (especially Streptomyces) are one of the main sources of agricultural antibiotics. Gene screening in early stage has found that Streptomyces cavourensis NA4 to have the potential to produce a variety of PKS and NRPS type compounds, however, only bafilomycins of PKS I type against plant pathogenic fungi were isolated. In order to burrow more antifungal guiding compounds, a genome scanning draft of S. cavourensis NA4 was obtained using Hiseq2500 high throughput sequencing technology, it was found through bioinformatic analysis and literature retrieval, strain NA4 also possessing the potential production of polycyclic tetramate macrolactam (PTM), alkylresorcinol, and valinomycin type antifungal active matter, except for producing bafilomycins. In order to activate these gene clusters, through changing the components of carbon and nitrogen sources in the medium, and adding amino acid precursors and different metal ions, and applying activity tracing as well as HPLC-UV, it was found that using pollard to replace glycerol in NM2 medium cultural conditions could activate frontalamides synthetic gene cluster of PTM. There were seven main compounds being PTM type compound, among them three possibly were new compounds. In this study, the PTM gene cluster was activated adopting culture regulation, and it provided a guidance for further separation and identification of novel PTM compounds.
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